Package index
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assignCommunities() - Assign communities to interactions
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connectLoopAnchors() - connectLoopAnchors
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mergeAnchors() - Merge neighboring loop anchor positions into one representative anchor.
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plotHicCommunities() - Plot Hi-C data with loops colored by community assignment.
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scoreInteractions(<GInteractions>,<character>)scoreInteractions(<InteractionArray>,<missing>) - Score loop counts using enrichment of foreground over background